EnhancerDB
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Enhancers that have rs561530446[chr17:79065016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79058967 79071355 enh17435
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 79064673 79065032 vista26378
VISTA
Transcript factors that have rs561530446[chr17:79065016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79064746 79065807 ZNF274 GTRD no Bone Marrow (K562) 21797627
chr17 79064746 79065807 ZNF274 GTRD no Bone Marrow (K562) 108308597
chr17 79064758 79065853 ZBTB33 GTRD no Lung (A549) 108308598
chr17 79064811 79065626 ZNF143 GTRD no Epithelial (MCF-7) 21797628
chr17 79064811 79065626 ZNF143 GTRD no Epithelial (MCF-7) 108308599
chr17 79064832 79065846 ZBTB33 GTRD no Lung (A549) 108308600
chr17 79064873 79065733 ZNF143 GTRD no Epithelial (MCF-7) 21797629
chr17 79064873 79065733 ZNF143 GTRD no Epithelial (MCF-7) 108308601
chr17 79064877 79065735 ZNF274 GTRD no Liver (HepG2) 21797630
chr17 79064877 79065735 ZNF274 GTRD no Liver (HepG2) 108308602
chr17 79064879 79065688 ZNF274 GTRD no Bone Marrow (K562) 21797631
chr17 79064879 79065688 ZNF274 GTRD no Bone Marrow (K562) 108308603
chr17 79064884 79065667 ZNF274 GTRD no Blood (GM12878) 108308604
chr17 79064932 79065547 ZNF274 GTRD no Bone Marrow (K562) 21797632
chr17 79064932 79065547 ZNF274 GTRD no Bone Marrow (K562) 108308605
chr17 79064948 79065656 ZNF274 GTRD no Bone Marrow (K562) 21797633
chr17 79064948 79065656 ZNF274 GTRD no Bone Marrow (K562) 108308606
chr17 79064951 79065490 ZNF274 GTRD no Blood (GM12878) 108308607
chr17 79064954 79065561 ZBTB33 GTRD no Lung (A549) 108308608
chr17 79064955 79065712 ZBTB33 GTRD no Lung (A549) 108308609
chr17 79064958 79065549 ZNF143 GTRD no Epithelial (MCF-7) 21797634
chr17 79064958 79065549 ZNF143 GTRD no Epithelial (MCF-7) 108308610
chr17 79064962 79065571 ZNF274 GTRD no Bone Marrow (K562) 21797635
chr17 79064962 79065571 ZNF274 GTRD no Bone Marrow (K562) 108308611
chr17 79064966 79065414 ZNF274 GTRD no Bone Marrow (K562) 21797636
chr17 79064966 79065414 ZNF274 GTRD no Bone Marrow (K562) 108308612
chr17 79064968 79065600 ZNF274 GTRD no Bone Marrow (K562) 21797637
chr17 79064968 79065600 ZNF274 GTRD no Bone Marrow (K562) 108308613
chr17 79064969 79065565 ZNF274 GTRD no Bone Marrow (K562) 21797638
chr17 79064969 79065565 ZNF274 GTRD no Bone Marrow (K562) 108308614
chr17 79064969 79065584 ZNF274 GTRD no Bone Marrow (K562) 21797639
chr17 79064969 79065584 ZNF274 GTRD no Bone Marrow (K562) 108308615
chr17 79064972 79065511 CTCF GTRD no Spleen 108308616
chr17 79064972 79065599 ZNF274 GTRD no Bone Marrow (K562) 21797640
chr17 79064972 79065599 ZNF274 GTRD no Bone Marrow (K562) 108308617
chr17 79064972 79065697 ZBTB33 GTRD no Lung (A549) 108308618
chr17 79064975 79065611 ZNF274 GTRD no Bone Marrow (K562) 21797641
chr17 79064975 79065611 ZNF274 GTRD no Bone Marrow (K562) 108308619
chr17 79064996 79065016 RREB1 JASPAR yes 21317087
chr17 79064996 79065016 RREB1 JASPAR yes 56305028
chr17 79065001 79065021 RREB1 JASPAR yes 21317089
chr17 79065001 79065021 RREB1 JASPAR yes 56305030
chr17 79065003 79065610 ZNF143 GTRD no Epithelial (MCF-7) 21797642
chr17 79065003 79065610 ZNF143 GTRD no Epithelial (MCF-7) 108308620
chr17 79065004 79065019 RUNX2 JASPAR yes 21317090
chr17 79065004 79065019 RUNX2 JASPAR yes 56305031
chr17 79065006 79065020 PLAG1 JASPAR yes 21317091
chr17 79065006 79065020 PLAG1 JASPAR yes 56305032
Genes associated with rs561530446[chr17:79065016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More