EnhancerDB
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  3. rs561535921[chr1:24530438]
Enhancers that have rs561535921[chr1:24530438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24520263 24535320 enh49684
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Breast Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Epithelial (MCF-7)
Transcript factors that have rs561535921[chr1:24530438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24530427 24530438 USF2 JASPAR yes 27486720
chr1 24530428 24530438 TFEB JASPAR yes 27486721
chr1 24530432 24530453 IRF1 JASPAR yes 27486722
chr1 24530436 24530451 FOXP1 JASPAR yes 27486723
chr1 24530437 24530452 FOXP1 JASPAR yes 27486724
chr1 24530438 24530453 FOXP1 JASPAR yes 27486725
chr1 24530438 24530459 IRF1 JASPAR yes 27486726
Genes associated with rs561535921[chr1:24530438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More