EnhancerDB
  1. Home
  2. SNP
  3. rs561560198[chr17:2166012]
Enhancers that have rs561560198[chr17:2166012]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2160245 2169115 enh32051
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs561560198[chr17:2166012]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2166000 2166016 T JASPAR yes 52744498
chr17 2166004 2166015 HOXA10 JASPAR yes 52744499
chr17 2166005 2166014 CDX1 JASPAR yes 52744500
chr17 2166005 2166016 CDX2 JASPAR yes 52744501
Genes associated with rs561560198[chr17:2166012], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More