EnhancerDB
  1. Home
  2. SNP
  3. rs561652290[chr5:150000484]
Enhancers that have rs561652290[chr5:150000484]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149998886 150027071 enh22720
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561652290[chr5:150000484]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150000465 150000486 IRF1 JASPAR yes 66894216
chr5 150000465 150000486 ZNF263 JASPAR yes 66894217
chr5 150000469 150000490 IRF1 JASPAR yes 66894218
chr5 150000469 150000490 ZNF263 JASPAR yes 66894219
chr5 150000473 150000494 IRF1 JASPAR yes 66894220
chr5 150000473 150000494 ZNF263 JASPAR yes 66894221
chr5 150000477 150000498 IRF1 JASPAR yes 66894222
chr5 150000477 150000498 ZNF263 JASPAR yes 66894223
chr5 150000481 150000502 IRF1 JASPAR yes 66894224
chr5 150000481 150000502 ZNF263 JASPAR yes 66894225
Genes associated with rs561652290[chr5:150000484], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More