EnhancerDB
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  3. rs561783979[chr2:236427452]
Enhancers that have rs561783979[chr2:236427452]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561783979[chr2:236427452]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236427441 236427453 NHLH1 JASPAR yes 81977326
chr2 236427442 236427452 NHLH1 JASPAR yes 81977327
chr2 236427452 236427469 RARA JASPAR yes 81977328
chr2 236427452 236427469 RXRA JASPAR yes 81977329
Genes associated with rs561783979[chr2:236427452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More