EnhancerDB
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  3. rs561785541[chr17:70408906]
Enhancers that have rs561785541[chr17:70408906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs561785541[chr17:70408906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70408684 70409273 ZNF274 GTRD no Liver (HepG2) 21784780
chr17 70408723 70409242 ZNF274 GTRD no Liver (HepG2) 21784781
chr17 70408759 70409149 ZNF274 GTRD no Liver (HepG2) 21784782
chr17 70408812 70409102 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784783
chr17 70408898 70408908 TBX21 JASPAR yes 55785025
chr17 70408898 70408909 TBX20 JASPAR yes 55785026
chr17 70408898 70408909 TBX2 JASPAR yes 55785027
chr17 70408898 70408911 EOMES JASPAR yes 55785028
chr17 70408899 70408909 TBR1 JASPAR yes 55785029
chr17 70408902 70408917 FOXP1 JASPAR yes 55785030
chr17 70408905 70408911 TBP TRANSFAC yes 55785031
Genes associated with rs561785541[chr17:70408906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More