EnhancerDB
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  3. rs56179818[chr17:27469998]
Enhancers that have rs56179818[chr17:27469998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56179818[chr17:27469998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27469994 27470009 MEF2A JASPAR yes 53716732
chr17 27469995 27470010 MEF2C JASPAR yes 53716733
chr17 27469996 27470008 MEF2A JASPAR yes 53716734
chr17 27469996 27470008 MEF2B JASPAR yes 53716735
chr17 27469996 27470008 MEF2D JASPAR yes 53716736
chr17 27469998 27470002 YY1 TRANSFAC yes 53716737
Genes associated with rs56179818[chr17:27469998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More