EnhancerDB
  1. Home
  2. SNP
  3. rs561813984[chr17:42623324]
Enhancers that have rs561813984[chr17:42623324]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42617298 42627575 enh17183
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Stomach
Transcript factors that have rs561813984[chr17:42623324]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42622963 42624862 ZBTB33 GTRD no Lung (A549) 107688164
chr17 42622963 42624862 ZBTB33 GTRD no Lung (A549) 108263058
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 21762453
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 107688165
chr17 42623195 42624905 ZNF274 GTRD no Bone Marrow (K562) 108263059
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 21762454
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 107688166
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 108263060
chr17 42623233 42624893 ZNF274 GTRD no Bone Marrow (K562) 21762455
chr17 42623233 42624893 ZNF274 GTRD no Bone Marrow (K562) 107688167
chr17 42623233 42624893 ZNF274 GTRD no Bone Marrow (K562) 108263061
chr17 42623258 42623796 ZNF274 GTRD no Bone Marrow (K562) 21762456
chr17 42623298 42623544 ZNF274 GTRD no Bone Marrow (K562) 21762457
chr17 42623324 42623341 RARA JASPAR yes 54405955
Genes associated with rs561813984[chr17:42623324], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More