EnhancerDB
  1. Home
  2. SNP
  3. rs561822877[chr16:29625417]
Enhancers that have rs561822877[chr16:29625417]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs561822877[chr16:29625417]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29624954 29625464 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21703102
chr16 29625405 29625420 TFAP2A JASPAR yes 10269124
chr16 29625405 29625420 TFAP2C JASPAR yes 10269125
chr16 29625406 29625420 TLX1 JASPAR yes 10269126
chr16 29625407 29625421 TLX1 JASPAR yes 10269127
chr16 29625407 29625422 TFAP2A JASPAR yes 10269128
chr16 29625407 29625422 TFAP2C JASPAR yes 10269129
chr16 29625408 29625419 TFAP2A JASPAR yes 10269130
chr16 29625408 29625419 TFAP2B JASPAR yes 10269131
chr16 29625408 29625419 TFAP2C JASPAR yes 10269132
Genes associated with rs561822877[chr16:29625417], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More