EnhancerDB
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  3. rs56183378[chr17:55736608]
Enhancers that have rs56183378[chr17:55736608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55736279 55747115 enh4495
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56183378[chr17:55736608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55736589 55736609 RREB1 JASPAR yes 54980233
chr17 55736591 55736611 RREB1 JASPAR yes 54980234
chr17 55736596 55736611 FOXP1 JASPAR yes 54980235
chr17 55736596 55736617 IRF1 JASPAR yes 54980236
chr17 55736597 55736618 IRF1 JASPAR yes 54980237
chr17 55736603 55736609 TCF4 TRANSFAC yes 54980238
chr17 55736603 55736618 FOXP1 JASPAR yes 54980239
chr17 55736603 55736624 IRF1 JASPAR yes 54980240
chr17 55736604 55736615 FOXP2 JASPAR yes 54980241
chr17 55736605 55736620 FOXP1 JASPAR yes 54980242
chr17 55736605 55736626 IRF1 JASPAR yes 54980243
Genes associated with rs56183378[chr17:55736608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More