EnhancerDB
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  3. rs561853224[chr12:50604211]
Enhancers that have rs561853224[chr12:50604211]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50600876 50615015 enh2345
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs561853224[chr12:50604211]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50604196 50604211 MEF2C JASPAR yes 120818522
chr12 50604199 50604214 FOXP1 JASPAR yes 120818523
chr12 50604200 50604215 FOXP1 JASPAR yes 120818524
chr12 50604200 50604221 IRF1 JASPAR yes 120818525
chr12 50604201 50604216 FOXP1 JASPAR yes 120818526
chr12 50604201 50604222 IRF1 JASPAR yes 120818527
chr12 50604202 50604217 FOXP1 JASPAR yes 120818528
chr12 50604202 50604223 IRF1 JASPAR yes 120818529
chr12 50604203 50604218 FOXP1 JASPAR yes 120818530
chr12 50604203 50604224 IRF1 JASPAR yes 120818531
chr12 50604204 50604219 FOXP1 JASPAR yes 120818532
chr12 50604206 50604221 FOXP1 JASPAR yes 120818533
chr12 50604207 50604228 IRF1 JASPAR yes 120818534
chr12 50604208 50604223 FOXP1 JASPAR yes 120818535
chr12 50604208 50604229 IRF1 JASPAR yes 120818536
chr12 50604209 50604230 IRF1 JASPAR yes 120818537
chr12 50604211 50604232 IRF1 JASPAR yes 120818538
Genes associated with rs561853224[chr12:50604211], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More