EnhancerDB
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  3. rs56185550[chr1:43928455]
Enhancers that have rs56185550[chr1:43928455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs56185550[chr1:43928455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43928445 43928460 TFAP2A JASPAR yes 28496388
chr1 43928445 43928460 TFAP2C JASPAR yes 28496389
chr1 43928446 43928457 TFAP2A JASPAR yes 28496390
chr1 43928446 43928457 TFAP2B JASPAR yes 28496391
chr1 43928446 43928457 TFAP2C JASPAR yes 28496392
chr1 43928447 43928456 TFAP2A JASPAR yes 28496393
Genes associated with rs56185550[chr1:43928455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More