EnhancerDB
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  3. rs561879988[chr19:4980780]
Enhancers that have rs561879988[chr19:4980780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561879988[chr19:4980780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4980772 4980788 GLIS1 JASPAR yes 112201836
chr19 4980773 4980787 GLIS2 JASPAR yes 112201837
chr19 4980773 4980787 GLIS3 JASPAR yes 112201838
chr19 4980775 4980785 ZNF740 JASPAR yes 112201839
chr19 4980780 4980791 NFKB1 JASPAR yes 112201840
Genes associated with rs561879988[chr19:4980780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More