EnhancerDB
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  3. rs561898740[chr16:88361369]
Enhancers that have rs561898740[chr16:88361369]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs561898740[chr16:88361369]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88361360 88361375 SCRT1 JASPAR yes 12279074
chr16 88361360 88361375 ZIC4 JASPAR yes 12279075
chr16 88361361 88361375 ZIC1 JASPAR yes 12279076
chr16 88361363 88361375 PKNOX1 JASPAR yes 12279077
chr16 88361363 88361375 TGIF1 JASPAR yes 12279078
chr16 88361363 88361375 TGIF2 JASPAR yes 12279079
chr16 88361364 88361373 SNAI2 JASPAR yes 12279080
chr16 88361364 88361374 ID4 JASPAR yes 12279081
chr16 88361364 88361374 MSC JASPAR yes 12279082
chr16 88361364 88361374 TCF3 JASPAR yes 12279083
chr16 88361367 88361375 TBX15 JASPAR yes 12279084
chr16 88361367 88361375 TBX1 JASPAR yes 12279085
chr16 88361367 88361375 TBX4 JASPAR yes 12279086
chr16 88361367 88361375 TBX5 JASPAR yes 12279087
Genes associated with rs561898740[chr16:88361369], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More