EnhancerDB
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  3. rs561900353[chr12:58808538]
Enhancers that have rs561900353[chr12:58808538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58804159 58816575 enh29596
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Pancreas (Panc1) Lung (PC-9) Breast Spleen Epithelial (MCF-7)
Transcript factors that have rs561900353[chr12:58808538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58808170 58808580 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21551993
chr12 58808518 58808539 ZNF263 JASPAR yes 121172010
chr12 58808519 58808539 RREB1 JASPAR yes 121172011
chr12 58808520 58808540 RREB1 JASPAR yes 121172012
chr12 58808520 58808541 ZNF263 JASPAR yes 121172013
chr12 58808522 58808542 RREB1 JASPAR yes 121172015
chr12 58808523 58808543 RREB1 JASPAR yes 121172016
chr12 58808525 58808545 RREB1 JASPAR yes 121172018
chr12 58808527 58808547 RREB1 JASPAR yes 121172021
chr12 58808527 58808548 ZNF263 JASPAR yes 121172022
chr12 58808528 58808538 SP1 JASPAR yes 121172023
chr12 58808528 58808538 ZNF740 JASPAR yes 121172024
chr12 58808530 58808540 ZNF740 JASPAR yes 121172025
chr12 58808530 58808551 ZNF263 JASPAR yes 121172026
chr12 58808531 58808541 SP1 JASPAR yes 121172027
chr12 58808532 58808542 SP1 JASPAR yes 121172028
chr12 58808532 58808553 ZNF263 JASPAR yes 121172029
chr12 58808535 58808540 SP1 TRANSFAC yes 121172030
chr12 58808536 58808546 ZNF740 JASPAR yes 121172031
chr12 58808537 58808542 TFAP2A TRANSFAC yes 121172032
chr12 58808537 58808543 MZF1 JASPAR yes 121172033
chr12 58808537 58808558 ZNF263 JASPAR yes 121172034
Genes associated with rs561900353[chr12:58808538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More