EnhancerDB
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  3. rs56194664[chr1:11999942]
Enhancers that have rs56194664[chr1:11999942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 11996824 12003175 enh26533
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs56194664[chr1:11999942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 11999935 11999948 ZBTB18 JASPAR yes 26792215
chr1 11999936 11999948 PKNOX1 JASPAR yes 26792216
chr1 11999936 11999948 TGIF1 JASPAR yes 26792217
chr1 11999937 11999946 SNAI2 JASPAR yes 26792218
chr1 11999937 11999947 FIGLA JASPAR yes 26792219
chr1 11999937 11999947 ID4 JASPAR yes 26792220
chr1 11999937 11999947 TCF3 JASPAR yes 26792221
chr1 11999937 11999947 TCF4 JASPAR yes 26792222
chr1 11999939 11999948 ZEB1 JASPAR yes 26792223
chr1 11999939 11999949 TBX21 JASPAR yes 26792224
chr1 11999940 11999948 MGA JASPAR yes 26792225
chr1 11999940 11999948 TBX15 JASPAR yes 26792226
chr1 11999940 11999948 TBX1 JASPAR yes 26792227
chr1 11999940 11999948 TBX4 JASPAR yes 26792228
chr1 11999940 11999948 TBX5 JASPAR yes 26792229
chr1 11999940 11999950 TBR1 JASPAR yes 26792230
chr1 11999940 11999953 SMAD2 JASPAR yes 26792231
Genes associated with rs56194664[chr1:11999942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More