EnhancerDB
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  3. rs561959660[chr16:88283025]
Enhancers that have rs561959660[chr16:88283025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs561959660[chr16:88283025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88281476 88283271 ZNF274 GTRD no Cervix (HeLa-S3) 21735638
chr16 88281713 88283270 ZNF274 GTRD no Cervix (HeLa-S3) 21735642
chr16 88281803 88283101 ZNF274 GTRD no Cervix (HeLa-S3) 21735645
chr16 88281947 88283092 TCF7L2 GTRD no Colon (HCT116) 21735648
chr16 88282073 88283234 ZNF143 GTRD no Epithelial (MCF-7) 21735654
chr16 88282143 88283343 ZNF143 GTRD no Epithelial (MCF-7) 21735657
chr16 88282175 88283062 ZBTB33 GTRD no Brain (SK-N-SH) 21735659
chr16 88282422 88283030 MYOD GTRD no Muscle (Myoblast) 21735662
chr16 88282472 88283061 ZNF274 GTRD no Cervix (HeLa-S3) 21735663
chr16 88283005 88283026 ZNF263 JASPAR yes 12271093
chr16 88283007 88283028 IRF1 JASPAR yes 12271096
chr16 88283008 88283029 ZNF263 JASPAR yes 12271098
chr16 88283013 88283034 IRF1 JASPAR yes 12271101
chr16 88283015 88283030 PRDM1 JASPAR yes 12271102
chr16 88283015 88283030 STAT2 JASPAR yes 12271103
chr16 88283016 88283030 SPIC JASPAR yes 12271104
chr16 88283016 88283030 STAT1 JASPAR yes 12271105
chr16 88283017 88283031 IRF7 JASPAR yes 12271106
chr16 88283017 88283031 IRF8 JASPAR yes 12271107
chr16 88283017 88283032 IRF9 JASPAR yes 12271108
chr16 88283017 88283038 IRF1 JASPAR yes 12271109
chr16 88283018 88283033 FOXP1 JASPAR yes 12271110
chr16 88283019 88283034 PRDM1 JASPAR yes 12271111
chr16 88283019 88283040 IRF1 JASPAR yes 12271112
chr16 88283021 88283036 STAT2 JASPAR yes 12271113
chr16 88283022 88283036 STAT1 JASPAR yes 12271114
chr16 88283023 88283037 IRF7 JASPAR yes 12271115
chr16 88283023 88283044 IRF1 JASPAR yes 12271116
chr16 88283024 88283039 FOXP1 JASPAR yes 12271117
chr16 88283024 88283045 IRF1 JASPAR yes 12271118
chr16 88283025 88283040 PRDM1 JASPAR yes 12271119
chr16 88283025 88283046 IRF1 JASPAR yes 12271120
Genes associated with rs561959660[chr16:88283025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More