EnhancerDB
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  3. rs56196209[chr17:53660067]
Enhancers that have rs56196209[chr17:53660067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs56196209[chr17:53660067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53660054 53660070 RFX3 JASPAR yes 54862016
chr17 53660054 53660070 RFX5 JASPAR yes 54862017
chr17 53660055 53660074 RFX2 JASPAR yes 54862019
chr17 53660063 53660073 ALX3 JASPAR yes 54862020
chr17 53660063 53660073 EMX1 JASPAR yes 54862021
chr17 53660063 53660073 EMX2 JASPAR yes 54862022
chr17 53660063 53660073 EN2 JASPAR yes 54862023
chr17 53660063 53660073 ESX1 JASPAR yes 54862024
chr17 53660063 53660073 EVX1 JASPAR yes 54862025
chr17 53660063 53660073 EVX2 JASPAR yes 54862026
chr17 53660063 53660073 GBX1 JASPAR yes 54862027
chr17 53660063 53660073 GBX2 JASPAR yes 54862028
chr17 53660063 53660073 GSX1 JASPAR yes 54862029
chr17 53660063 53660073 HOXA2 JASPAR yes 54862030
chr17 53660063 53660073 HOXB2 JASPAR yes 54862031
chr17 53660063 53660073 HOXB3 JASPAR yes 54862032
chr17 53660063 53660073 LHX2 JASPAR yes 54862033
chr17 53660063 53660073 LHX6 JASPAR yes 54862034
chr17 53660063 53660073 MEOX1 JASPAR yes 54862035
chr17 53660063 53660073 MEOX2 JASPAR yes 54862036
chr17 53660063 53660073 NOTO JASPAR yes 54862037
chr17 53660064 53660072 DLX6 JASPAR yes 54862038
chr17 53660064 53660072 EN1 JASPAR yes 54862039
chr17 53660064 53660072 LBX1 JASPAR yes 54862040
chr17 53660064 53660072 PAX4 JASPAR yes 54862041
chr17 53660064 53660072 PDX1 JASPAR yes 54862042
chr17 53660064 53660072 VAX1 JASPAR yes 54862043
chr17 53660064 53660072 VAX2 JASPAR yes 54862044
chr17 53660064 53660072 VSX1 JASPAR yes 54862045
chr17 53660064 53660072 VSX2 JASPAR yes 54862046
Genes associated with rs56196209[chr17:53660067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More