EnhancerDB
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  3. rs561971603[chr19:13190440]
Enhancers that have rs561971603[chr19:13190440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs561971603[chr19:13190440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13190430 13190444 TLX1 JASPAR yes 112509186
chr19 13190438 13190450 TFAP2A JASPAR yes 112509187
chr19 13190438 13190450 TFAP2B JASPAR yes 112509188
chr19 13190438 13190450 TFAP2C JASPAR yes 112509189
chr19 13190438 13190453 TFAP2A JASPAR yes 112509190
Genes associated with rs561971603[chr19:13190440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More