EnhancerDB
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  3. rs562027391[chr1:234698352]
Enhancers that have rs562027391[chr1:234698352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234695125 234703195 enh12791
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Placenta Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs562027391[chr1:234698352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234697867 234698483 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394561
chr1 234697960 234698400 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394562
chr1 234698017 234698641 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394564
chr1 234698056 234698356 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394566
chr1 234698350 234698365 LEF1 JASPAR yes 36288881
chr1 234698351 234698365 TCF7L2 JASPAR yes 36288882
Genes associated with rs562027391[chr1:234698352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More