EnhancerDB
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  3. rs56204559[chr1:220469477]
Enhancers that have rs56204559[chr1:220469477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220466225 220478595 enh12679
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs56204559[chr1:220469477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220469458 220469479 IRF1 JASPAR yes 35482222
chr1 220469461 220469482 IRF1 JASPAR yes 35482225
chr1 220469467 220469482 FOXP1 JASPAR yes 35482226
chr1 220469475 220469493 IRF2 JASPAR yes 35482227
Genes associated with rs56204559[chr1:220469477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More