EnhancerDB
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  3. rs562107009[chr12:120525146]
Enhancers that have rs562107009[chr12:120525146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120520214 120527503 enh2634
Bone Marrow (K562) Cervix (HeLa-S3) Blood (T-cell) Blood (OCI-LY7) Placenta Uterus Blood (Karpas-422) Pancreas (Panc1) Neural Stem Cells (H9) Thymus
chr12 120524802 120525368 vista15109
VISTA
Transcript factors that have rs562107009[chr12:120525146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120524502 120525456 POLR2A UCSC Txn Factor no Conserved 108062657
chr12 120524538 120525222 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062659
chr12 120524572 120525172 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108062661
chr12 120524590 120525166 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062664
chr12 120524593 120525163 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108062665
chr12 120524597 120525193 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21578217
chr12 120524597 120525193 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108062668
chr12 120524599 120525255 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062670
chr12 120524601 120525217 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108062673
chr12 120524636 120525246 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108062683
chr12 120524666 120525170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21578230
chr12 120524666 120525170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108062699
chr12 120524671 120525191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062702
chr12 120524674 120525150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21578233
chr12 120524674 120525150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108062704
chr12 120524680 120525159 MXI1 UCSC Txn Factor no Conserved 108062707
chr12 120524682 120525218 SIN3A UCSC Txn Factor no Conserved 108062708
chr12 120524682 120525218 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062709
chr12 120524718 120525194 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21578247
chr12 120524718 120525194 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108062746
chr12 120524723 120525159 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062754
chr12 120524726 120525162 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062756
chr12 120524734 120525158 RFX5 UCSC Txn Factor no Conserved 108062765
chr12 120524737 120525177 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21578254
chr12 120524737 120525177 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108062767
chr12 120524746 120525342 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062774
chr12 120524749 120525273 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578258
chr12 120524749 120525273 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108062777
chr12 120524782 120525158 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108062809
chr12 120524786 120525224 ELF1 UCSC Txn Factor no Conserved 108062813
chr12 120524787 120525171 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062815
chr12 120524788 120525224 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062816
chr12 120524789 120525289 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062818
chr12 120524800 120525170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21578270
chr12 120524800 120525170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108062825
chr12 120524806 120525176 RCOR1 UCSC Txn Factor no Conserved 108062829
chr12 120524806 120525176 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108062830
chr12 120524809 120525465 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108062835
chr12 120524820 120525204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108062836
chr12 120524821 120525168 SP1 UCSC Txn Factor no Conserved 108062839
chr12 120524823 120525153 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108062840
chr12 120524832 120525168 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108062841
chr12 120524835 120525345 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578275
chr12 120524835 120525345 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108062842
chr12 120524841 120525331 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108062844
chr12 120524862 120525186 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578276
chr12 120524862 120525186 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108062846
chr12 120524863 120525183 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062847
chr12 120524876 120525146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062849
chr12 120524876 120525226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578277
chr12 120524876 120525226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108062850
chr12 120524885 120525261 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108062852
chr12 120524903 120525279 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108062854
chr12 120524970 120525360 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108062861
chr12 120525067 120525418 RUNX3 UCSC Txn Factor no Conserved 108062863
chr12 120525067 120525418 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062864
chr12 120525072 120525456 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108062865
chr12 120525085 120525401 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108062866
chr12 120525096 120525356 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062867
chr12 120525119 120525395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062868
chr12 120525136 120526754 AR GTRD no Prostate (PC-3) 108062869
chr12 120525146 120525151 SP1 TRANSFAC yes 82487076
chr12 120525146 120525151 SP1 TRANSFAC yes 124152311
Genes associated with rs562107009[chr12:120525146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More