EnhancerDB
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  3. rs562134224[chr17:42896554]
Enhancers that have rs562134224[chr17:42896554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42894605 42906230 enh32204
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus
Transcript factors that have rs562134224[chr17:42896554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42896540 42896559 REST JASPAR yes 54415723
chr17 42896548 42896562 STAT1 JASPAR yes 54415724
Genes associated with rs562134224[chr17:42896554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More