EnhancerDB
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  3. rs562158451[chr1:230217223]
Enhancers that have rs562158451[chr1:230217223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs562158451[chr1:230217223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230217220 230217224 NFE TRANSFAC yes 36019292
chr1 230217220 230217225 GATA1 TRANSFAC yes 36019293
chr1 230217220 230217226 GATA3 JASPAR yes 36019294
Genes associated with rs562158451[chr1:230217223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More