EnhancerDB
  1. Home
  2. SNP
  3. rs562169740[chr1:9611477]
Enhancers that have rs562169740[chr1:9611477]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562169740[chr1:9611477]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9611472 9611477 TFAP2A TRANSFAC yes 26660986
chr1 9611472 9611478 MZF1 JASPAR yes 26660987
chr1 9611474 9611484 NFKB1 JASPAR yes 26660988
Genes associated with rs562169740[chr1:9611477], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More