EnhancerDB
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  3. rs562196575[chr1:21860427]
Enhancers that have rs562196575[chr1:21860427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21858745 21871118 enh114
Liver (HepG2) Ovary Esophagus Bone (Osteoblast) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs562196575[chr1:21860427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21860414 21860429 FOXP1 JASPAR yes 27308986
chr1 21860415 21860430 FOXP1 JASPAR yes 27308987
chr1 21860415 21860436 IRF1 JASPAR yes 27308988
chr1 21860416 21860431 FOXP1 JASPAR yes 27308989
chr1 21860418 21860433 FOXP1 JASPAR yes 27308990
chr1 21860418 21860439 IRF1 JASPAR yes 27308991
chr1 21860421 21860442 IRF1 JASPAR yes 27308992
chr1 21860422 21860436 SPI1 JASPAR yes 27308993
chr1 21860423 21860444 ZNF263 JASPAR yes 27308994
chr1 21860424 21860445 IRF1 JASPAR yes 27308995
chr1 21860425 21860439 SPI1 JASPAR yes 27308996
chr1 21860426 21860447 ZNF263 JASPAR yes 27308997
chr1 21860427 21860448 IRF1 JASPAR yes 27308998
chr1 21860427 21860448 ZNF263 JASPAR yes 27308999
Genes associated with rs562196575[chr1:21860427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More