EnhancerDB
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  3. rs562206459[chr18:55898307]
Enhancers that have rs562206459[chr18:55898307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55895930 55912515 enh17738
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Heart
Transcript factors that have rs562206459[chr18:55898307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55898296 55898309 NFKB1 JASPAR yes 110929964
chr18 55898296 55898309 NFKB2 JASPAR yes 110929965
chr18 55898297 55898308 NFKB1 JASPAR yes 110929966
chr18 55898298 55898308 NFKB1 JASPAR yes 110929967
chr18 55898298 55898308 RELA JASPAR yes 110929968
chr18 55898298 55898308 REL JASPAR yes 110929969
chr18 55898307 55898311 NFE TRANSFAC yes 110929970
Genes associated with rs562206459[chr18:55898307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More