EnhancerDB
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  3. rs562219866[chr1:9141343]
Enhancers that have rs562219866[chr1:9141343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9133158 9143815 enh48
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs562219866[chr1:9141343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9141322 9141343 IRF1 JASPAR yes 26617619
chr1 9141323 9141344 IRF1 JASPAR yes 26617621
chr1 9141336 9141356 RREB1 JASPAR yes 26617624
chr1 9141337 9141357 RREB1 JASPAR yes 26617625
chr1 9141338 9141358 RREB1 JASPAR yes 26617626
chr1 9141340 9141355 FOXP1 JASPAR yes 26617627
chr1 9141342 9141357 FOXP1 JASPAR yes 26617628
Genes associated with rs562219866[chr1:9141343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More