EnhancerDB
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  3. rs562225458[chr17:55745621]
Enhancers that have rs562225458[chr17:55745621]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55736279 55747115 enh4495
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562225458[chr17:55745621]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55745613 55745631 NFYA JASPAR yes 54981593
chr17 55745617 55745621 H1TF2 TRANSFAC yes 54981594
chr17 55745617 55745621 NFE TRANSFAC yes 54981595
chr17 55745617 55745621 SRF TRANSFAC yes 54981596
Genes associated with rs562225458[chr17:55745621], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More