EnhancerDB
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  3. rs56225342[chr5:171582697]
Enhancers that have rs56225342[chr5:171582697]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs56225342[chr5:171582697]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171582680 171582697 BCL6B JASPAR yes 67768983
chr5 171582691 171582706 FOXP1 JASPAR yes 67768984
chr5 171582692 171582707 FOXP1 JASPAR yes 67768985
chr5 171582693 171582714 IRF1 JASPAR yes 67768986
chr5 171582694 171582709 FOXP1 JASPAR yes 67768987
chr5 171582695 171582710 FOXP1 JASPAR yes 67768988
Genes associated with rs56225342[chr5:171582697], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More