EnhancerDB
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  3. rs56227030[chr2:235378288]
Enhancers that have rs56227030[chr2:235378288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235366405 235380795 enh19344
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs56227030[chr2:235378288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235378276 235378290 JUN JASPAR yes 81882042
chr2 235378278 235378289 BATF JASPAR yes 81882043
chr2 235378279 235378290 FOSL2 JASPAR yes 81882044
chr2 235378279 235378290 JUNB JASPAR yes 81882045
chr2 235378280 235378291 FOS JASPAR yes 81882046
chr2 235378280 235378291 FOSL1 JASPAR yes 81882047
chr2 235378280 235378291 JUND JASPAR yes 81882048
chr2 235378280 235378300 PPARG JASPAR yes 81882049
chr2 235378281 235378290 JDP2 JASPAR yes 81882050
chr2 235378281 235378292 JUNB JASPAR yes 81882051
chr2 235378281 235378295 JUN JASPAR yes 81882052
chr2 235378282 235378289 JUN TRANSFAC yes 81882053
chr2 235378282 235378293 BATF JASPAR yes 81882054
Genes associated with rs56227030[chr2:235378288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More