EnhancerDB
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  3. rs562276879[chr1:90424727]
Enhancers that have rs562276879[chr1:90424727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs562276879[chr1:90424727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90424716 90424731 MEF2C JASPAR yes 30639056
chr1 90424717 90424732 MEF2A JASPAR yes 30639057
chr1 90424718 90424730 MEF2A JASPAR yes 30639058
Genes associated with rs562276879[chr1:90424727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More