EnhancerDB
  1. Home
  2. SNP
  3. rs562317291[chr1:222004229]
Enhancers that have rs562317291[chr1:222004229]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562317291[chr1:222004229]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222004216 222004231 PRDM1 JASPAR yes 35572782
chr1 222004226 222004236 HOXA13 JASPAR yes 35572784
chr1 222004226 222004236 HOXB13 JASPAR yes 35572785
chr1 222004226 222004236 HOXD13 JASPAR yes 35572786
chr1 222004226 222004237 HOXA10 JASPAR yes 35572787
chr1 222004227 222004236 CDX1 JASPAR yes 35572788
chr1 222004227 222004238 CDX2 JASPAR yes 35572789
Genes associated with rs562317291[chr1:222004229], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More