EnhancerDB
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  3. rs562378755[chr16:11171328]
Enhancers that have rs562378755[chr16:11171328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11167765 11210995 enh3882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562378755[chr16:11171328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11171325 11171340 FOXP1 JASPAR yes 9483776
chr16 11171326 11171341 FOXP1 JASPAR yes 9483777
chr16 11171327 11171342 FOXP1 JASPAR yes 9483778
chr16 11171327 11171348 IRF1 JASPAR yes 9483779
chr16 11171328 11171343 FOXP1 JASPAR yes 9483780
chr16 11171328 11171349 IRF1 JASPAR yes 9483781
Genes associated with rs562378755[chr16:11171328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More