EnhancerDB
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  3. rs562380888[chr6:30495710]
Enhancers that have rs562380888[chr6:30495710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30493525 30503995 enh38943
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Blood (T-cell) Stomach
chr6 30495647 30495976 vista51519
VISTA
Transcript factors that have rs562380888[chr6:30495710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30495690 30495711 IRF1 JASPAR yes 70342964
chr6 30495690 30495711 IRF1 JASPAR yes 101038857
chr6 30495692 30495713 IRF1 JASPAR yes 70342966
chr6 30495692 30495713 IRF1 JASPAR yes 101038859
chr6 30495694 30495715 IRF1 JASPAR yes 70342971
chr6 30495694 30495715 IRF1 JASPAR yes 101038864
chr6 30495696 30495717 IRF1 JASPAR yes 70342972
chr6 30495696 30495717 IRF1 JASPAR yes 101038865
chr6 30495698 30495719 ZNF263 JASPAR yes 70342973
chr6 30495698 30495719 ZNF263 JASPAR yes 101038866
chr6 30495700 30495715 FOXP1 JASPAR yes 70342974
chr6 30495700 30495715 FOXP1 JASPAR yes 101038867
chr6 30495700 30495721 IRF1 JASPAR yes 70342975
chr6 30495700 30495721 IRF1 JASPAR yes 101038868
chr6 30495701 30495716 FOXP1 JASPAR yes 70342976
chr6 30495701 30495716 FOXP1 JASPAR yes 101038869
chr6 30495701 30495722 IRF1 JASPAR yes 70342977
chr6 30495701 30495722 IRF1 JASPAR yes 101038870
chr6 30495702 30495717 FOXP1 JASPAR yes 70342978
chr6 30495702 30495717 FOXP1 JASPAR yes 101038871
chr6 30495704 30495719 FOXP1 JASPAR yes 70342979
chr6 30495704 30495719 FOXP1 JASPAR yes 101038872
chr6 30495705 30495720 STAT2 JASPAR yes 70342980
chr6 30495705 30495720 STAT2 JASPAR yes 101038873
chr6 30495705 30495726 IRF1 JASPAR yes 70342981
chr6 30495705 30495726 IRF1 JASPAR yes 101038874
chr6 30495706 30495721 FOXP1 JASPAR yes 70342982
chr6 30495706 30495721 FOXP1 JASPAR yes 101038875
Genes associated with rs562380888[chr6:30495710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More