EnhancerDB
  1. Home
  2. SNP
  3. rs562397667[chr5:148850040]
Enhancers that have rs562397667[chr5:148850040]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148839549 148856135 enh38514
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Colon (HCT116) Breast Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs562397667[chr5:148850040]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148850022 148850043 IRF1 JASPAR yes 66818728
chr5 148850028 148850049 IRF1 JASPAR yes 66818732
chr5 148850029 148850041 MEF2D JASPAR yes 66818733
chr5 148850029 148850050 IRF1 JASPAR yes 66818734
chr5 148850034 148850055 IRF1 JASPAR yes 66818736
chr5 148850035 148850041 TCF4 TRANSFAC yes 66818737
chr5 148850035 148850050 FOXP1 JASPAR yes 66818738
chr5 148850035 148850056 IRF1 JASPAR yes 66818739
chr5 148850036 148850047 FOXP2 JASPAR yes 66818740
chr5 148850036 148850048 FOXC2 JASPAR yes 66818741
chr5 148850036 148850051 STAT2 JASPAR yes 66818742
chr5 148850037 148850052 FOXP1 JASPAR yes 66818743
Genes associated with rs562397667[chr5:148850040], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More