EnhancerDB
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  3. rs562410552[chr1:15743001]
Enhancers that have rs562410552[chr1:15743001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 15742467 15743324 vista486
VISTA
Transcript factors that have rs562410552[chr1:15743001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15741010 15743090 TCF7L2 GTRD no Colon (HCT116) 107802187
chr1 15742998 15743003 SP1 TRANSFAC yes 26983839
chr1 15742998 15743003 SP1 TRANSFAC yes 118236737
Genes associated with rs562410552[chr1:15743001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More