EnhancerDB
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  3. rs562418000[chr1:33403742]
Enhancers that have rs562418000[chr1:33403742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33395720 33407455 enh214
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs562418000[chr1:33403742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33403735 33403756 IRF1 JASPAR yes 28015067
chr1 33403736 33403751 MEF2C JASPAR yes 28015068
chr1 33403736 33403757 IRF1 JASPAR yes 28015069
chr1 33403737 33403758 IRF1 JASPAR yes 28015070
chr1 33403739 33403754 FOXP1 JASPAR yes 28015071
chr1 33403739 33403760 IRF1 JASPAR yes 28015072
chr1 33403740 33403755 FOXP1 JASPAR yes 28015073
chr1 33403740 33403761 IRF1 JASPAR yes 28015074
chr1 33403741 33403756 FOXP1 JASPAR yes 28015075
chr1 33403741 33403762 IRF1 JASPAR yes 28015076
chr1 33403742 33403757 FOXP1 JASPAR yes 28015077
chr1 33403742 33403763 IRF1 JASPAR yes 28015078
Genes associated with rs562418000[chr1:33403742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More