EnhancerDB
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  3. rs562421162[chr1:23163543]
Enhancers that have rs562421162[chr1:23163543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23150145 23164575 enh122
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Placenta Colon (HCT116) Breast Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs562421162[chr1:23163543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23163530 23163545 ZIC3 JASPAR yes 27397065
chr1 23163531 23163545 ZIC1 JASPAR yes 27397066
chr1 23163537 23163546 SP1 TRANSFAC yes 27397069
chr1 23163537 23163547 SP1 JASPAR yes 27397070
chr1 23163538 23163548 SP1 JASPAR yes 27397071
chr1 23163539 23163545 MAZ TRANSFAC yes 27397072
chr1 23163539 23163549 SP1 JASPAR yes 27397073
Genes associated with rs562421162[chr1:23163543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More