EnhancerDB
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  3. rs56242561[chr1:154791688]
Enhancers that have rs56242561[chr1:154791688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs56242561[chr1:154791688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154791686 154791698 NHLH1 JASPAR yes 32314289
chr1 154791687 154791697 NHLH1 JASPAR yes 32314290
Genes associated with rs56242561[chr1:154791688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 153963235 153964626 + RPS27 ENSG00000177954.7 153963235 827062 Heart 0.0913541 1291