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- rs562484174[chr18:53177294]
Enhancers that have rs562484174[chr18:53177294]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
53162865 |
53184715 |
enh4857 |
|
|
Transcript factors that have rs562484174[chr18:53177294]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
53176867
|
53178500
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108337488
|
|
|
chr18
|
53177018
|
53177374
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
108337489
|
|
|
chr18
|
53177120
|
53177430
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
108337490
|
|
|
chr18
|
53177283
|
53177298
|
LEF1
|
JASPAR
|
yes
|
|
110781682
|
|
|
chr18
|
53177284
|
53177298
|
TCF7L2
|
JASPAR
|
yes
|
|
110781683
|
|
|
chr18
|
53177290
|
53177302
|
FOXI1
|
JASPAR
|
yes
|
|
110781684
|
|
Genes associated with rs562484174[chr18:53177294], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |