EnhancerDB
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  3. rs562500298[chr1:208005133]
Enhancers that have rs562500298[chr1:208005133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562500298[chr1:208005133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208004720 208005292 ZNF274 GTRD no Bone Marrow (K562) 21374530
chr1 208004826 208005162 ZNF274 GTRD no Bone Marrow (K562) 21374531
chr1 208004911 208005291 ZNF143 GTRD no Epithelial (MCF-7) 21374532
chr1 208005067 208005727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374533
chr1 208005068 208005752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374534
chr1 208005082 208005472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374535
chr1 208005086 208005522 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374536
chr1 208005096 208005532 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374537
chr1 208005103 208005699 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374538
chr1 208005104 208005484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374539
chr1 208005109 208005629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374540
chr1 208005115 208005133 SRF JASPAR yes 34880072
chr1 208005116 208005636 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374541
chr1 208005120 208005140 TP53 JASPAR yes 34880073
chr1 208005126 208005396 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374542
chr1 208005133 208005353 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374543
Genes associated with rs562500298[chr1:208005133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More