EnhancerDB
  1. Home
  2. SNP
  3. rs562516817[chr1:230223327]
Enhancers that have rs562516817[chr1:230223327]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs562516817[chr1:230223327]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230223321 230223334 DUXA JASPAR yes 36020126
chr1 230223322 230223333 DUX4 JASPAR yes 36020127
Genes associated with rs562516817[chr1:230223327], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More