EnhancerDB
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  3. rs562517895[chr5:171612029]
Enhancers that have rs562517895[chr5:171612029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs562517895[chr5:171612029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171612022 171612036 ONECUT1 JASPAR yes 67772835
chr5 171612022 171612036 ONECUT2 JASPAR yes 67772836
chr5 171612022 171612036 ONECUT3 JASPAR yes 67772837
chr5 171612023 171612033 CUX1 JASPAR yes 67772838
chr5 171612023 171612033 CUX2 JASPAR yes 67772839
Genes associated with rs562517895[chr5:171612029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More