EnhancerDB
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  3. rs562543106[chr17:75343832]
Enhancers that have rs562543106[chr17:75343832]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562543106[chr17:75343832]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75343828 75343835 NKX3-1 JASPAR yes 56070386
chr17 75343832 75343842 TBX21 JASPAR yes 56070387
chr17 75343832 75343843 TBX20 JASPAR yes 56070388
chr17 75343832 75343843 TBX2 JASPAR yes 56070389
chr17 75343832 75343845 EOMES JASPAR yes 56070390
Genes associated with rs562543106[chr17:75343832], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More