EnhancerDB
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  3. rs562561792[chr1:235264300]
Enhancers that have rs562561792[chr1:235264300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235261105 235271828 enh998
Skin (Keratinocyte) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs562561792[chr1:235264300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235264128 235264414 ZNF274 GTRD no Blood (GM12878) 21403719
chr1 235264288 235264309 REST JASPAR yes 36352260
chr1 235264296 235264314 MAFF JASPAR yes 36352261
chr1 235264298 235264309 NRL JASPAR yes 36352262
chr1 235264298 235264313 MAFK JASPAR yes 36352263
Genes associated with rs562561792[chr1:235264300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More