EnhancerDB
  1. Home
  2. SNP
  3. rs562580772[chr1:6334479]
Enhancers that have rs562580772[chr1:6334479]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 6329205 6339045 enh11439
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs562580772[chr1:6334479]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 6334473 6334483 SP1 JASPAR yes 26385425
chr1 6334475 6334482 SP1 TRANSFAC yes 26385426
chr1 6334476 6334481 SP1 TRANSFAC yes 26385427
chr1 6334476 6334482 SP1 TRANSFAC yes 26385428
chr1 6334479 6334485 SP1 TRANSFAC yes 26385429
Genes associated with rs562580772[chr1:6334479], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More