EnhancerDB
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  3. rs562589369[chr16:379618]
Enhancers that have rs562589369[chr16:379618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs562589369[chr16:379618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 21683846
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 108170225
chr16 377933 380354 ZNF143 GTRD no Epithelial (MCF-7) 21683885
chr16 377933 380354 ZNF143 GTRD no Epithelial (MCF-7) 108170281
chr16 379606 379627 IRF1 JASPAR yes 9105377
chr16 379607 379628 IRF1 JASPAR yes 9105378
chr16 379611 379623 IRF1 JASPAR yes 9105379
chr16 379611 379625 IRF7 JASPAR yes 9105380
chr16 379611 379625 ONECUT3 JASPAR yes 9105381
chr16 379612 379633 IRF1 JASPAR yes 9105382
chr16 379613 379619 TCF4 TRANSFAC yes 9105383
chr16 379613 379628 FOXP1 JASPAR yes 9105384
chr16 379614 379625 FOXP2 JASPAR yes 9105385
chr16 379614 379626 FOXC2 JASPAR yes 9105386
chr16 379618 379633 FOXP1 JASPAR yes 9105387
Genes associated with rs562589369[chr16:379618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More