EnhancerDB
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  3. rs562598674[chr2:224725324]
Enhancers that have rs562598674[chr2:224725324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224709233 224738255 enh19264
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Blood (T-cell) Stomach
Transcript factors that have rs562598674[chr2:224725324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224725309 224725327 SRF JASPAR yes 81295351
chr2 224725311 224725326 MEF2C JASPAR yes 81295352
chr2 224725314 224725335 IRF1 JASPAR yes 81295353
chr2 224725318 224725333 FOXP1 JASPAR yes 81295354
chr2 224725318 224725339 IRF1 JASPAR yes 81295355
chr2 224725319 224725334 FOXP1 JASPAR yes 81295356
chr2 224725320 224725335 FOXP1 JASPAR yes 81295357
chr2 224725320 224725341 IRF1 JASPAR yes 81295358
chr2 224725321 224725336 FOXP1 JASPAR yes 81295359
Genes associated with rs562598674[chr2:224725324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More