EnhancerDB
  1. Home
  2. SNP
  3. rs562600808[chr1:15518791]
Enhancers that have rs562600808[chr1:15518791]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562600808[chr1:15518791]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15518781 15518791 RORA JASPAR yes 26969219
chr1 15518783 15518801 ESR2 JASPAR yes 26969220
chr1 15518783 15518801 NR3C1 JASPAR yes 26969221
chr1 15518784 15518792 NR4A2 JASPAR yes 26969222
chr1 15518785 15518805 ESR1 JASPAR yes 26969223
Genes associated with rs562600808[chr1:15518791], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More